Tumanyan, Vladimir G.: search on Z-Library

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1

Comparative analysis of the quality of a global algorithm and a local algorithm for alignment of two sequences

Valery O Polyanovsky, Mikhail A Roytberg, Vladimir G Tumanyan

Journal:

Algorithms for Molecular Biology

Year:

2011

Language:

english

File:

PDF, 334 KB

english, 2011

2

Are knowledge-based potentials derived from protein structure sets discriminative with respect to amino acid types?

Shamil R. Sunyaev, Frank Eisenhaber, Patrick Argos, Eugene N. Kuznetsov, Vladimir G. Tumanyan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1998

Language:

english

File:

PDF, 421 KB

english, 1998

3

Structural attributes of nucleotide sequences in promoter regions of supercoiling-sensitive genes: How to relate microarray expression data with genomic sequences

Galina I. Kravatskaya, Vladimir R. Chechetkin, Yury V. Kravatsky, Vladimir G. Tumanyan

Journal:

Year:

2013

Language:

english

File:

PDF, 2.67 MB

english, 2013

4

A Novel Model System for Design of Biomaterials Based on Recombinant Analogs of Spider Silk Proteins

Bogush, Vladimir G., Sokolova, Olga S., Davydova, Lyubov I., Klinov, Dmitri V., Sidoruk, Konstantin V., Esipova, Natalya G., Neretina, Tatyana V., Orchanskyi, Igor A., Makeev, Vsevolod Yu, Tumanyan, V

Journal:

Journal of Neuroimmune Pharmacology

Year:

2009

Language:

english

File:

PDF, 496 KB

english, 2009

5

Alternatingly twisted β-hairpins and nonglycine residues in the disallowed II′ region of the Ramachandran plot

Torshin, Ivan Yu., Esipova, Natalya G., Tumanyan, Vladimir G.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2014

Language:

english

File:

PDF, 346 KB

english, 2014

6

Comprehensive statistical analysis of residues interaction specificity at protein–protein interfaces

Anastasya Anashkina, Eugene Kuznetsov, Natalia Esipova, Vladimir Tumanyan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 241 KB

english, 2007

7

Hierarchy of Regions of Amino Acid Sequence with Respect to Their Role in the Protein Spatial Structure

Berezovsky, Igor N., Esipova, Natalia G., Tumanyan, Vladimir G.

Journal:

Journal of Computational Biology

Year:

2000

Language:

english

File:

PDF, 781 KB

english, 2000

8

Towards hierarchy of protein domain structure

Berezovsky, Igor N., Namiot, Vladimir A., Tumanyan, Vladimir G., Esipova, Natalia G.

Journal:

Biochemical Society Transactions

Year:

2000

Language:

english

File:

PDF, 155 KB

english, 2000

9

Omnipresence of the polyproline II helix in fibrous and globular proteins

Esipova, Natalia G, Tumanyan, Vladimir G

Journal:

Current Opinion in Structural Biology

Year:

2017

Language:

english

File:

PDF, 1.28 MB

english, 2017

10

A New Approach for the Calculation of the Energy of van der Waals Interactions in Macromolecules of Globular Proteins

Berezovsky, Igor N., Esipova, Natalia G., Tumanyan, Vladimir G., Namiot, Vladimir A.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2000

Language:

english

File:

PDF, 151 KB

english, 2000

11

Analysis of forces that determine helix formation in α-proteins

Gelena T. Kilosanidze, Alexey S. Kutsenko, Natalia G. Esipova, Vladimir G. Tumanyan

Journal:

Protein Science

Year:

2004

Language:

english

File:

PDF, 268 KB

english, 2004

12

Reconstruction of Genuine Pair-Wise Sequence Alignment

Polyanovsky, Valery, Roytberg, Mikhail A., Tumanyan, Vladimir G.

Journal:

Journal of Computational Biology

Year:

2008

Language:

english

File:

PDF, 151 KB

english, 2008

13

Numeric analysis of reversibility of classic movement equations and constructive criteria of estimating quality of molecular dynamic simulations

Yu. Torshin, Ivan, Namiot, Vladimir A., Esipova, Natalia G., Tumanyan, Vladimir G.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2020

File:

PDF, 903 KB

2020

14

Hierarchy of the Interaction Energy Distribution in the Spatial Structure of Globular Proteins and the Problem of Domain Definition

Berezovsky, Igor N., Namiot, Vladimir A., Tumanyan, Vladimir G., Esipova, Natalia G.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1999

Language:

english

File:

PDF, 1.43 MB

english, 1999

15

Representation of amino acid sequences in terms of interaction energy in protein globules

Igor N Berezovsky, Vladimir G Tumanyan, Natalia G Esipova

Journal:

Year:

1997

Language:

english

File:

PDF, 409 KB

english, 1997

16

Comprehensive conformational analysis of (Gly-Pro-Pro)n and (Gly-Pro-Hyp)n related to collagen

Vladimir G. Tumanyan, Natalia G. Esipova

Journal:

Year:

1982

Language:

english

File:

PDF, 959 KB

english, 1982

17

COOH-terminal decamers in proteins are non-random

Igor N Berezovsky, Gelena T Kilosanidze, Vladimir G Tumanyan, Lev Kisselev

Journal:

Year:

1997

Language:

english

File:

PDF, 400 KB

english, 1997

18

Use of molecular mechanics for secondary structure prediction. Is it possible to reveal α-helix?

Gelena T Kilosanidze, Alexey S Kutsenko, Natalia G Esipova, Vladimir G Tumanyan

Journal:

Year:

2002

Language:

english

File:

PDF, 215 KB

english, 2002

19

[WORLD SCIENTIFIC Proceedings of the 2nd International Conference - Florida, USA (4 – 7 June 1992)] Bioinformatics, Supercomputing and Complex Genome Analysis - FRACTAL DIMENSIONS OF OLIGONUCLEOTIDE COMPOSITIONS OF DNA SEQUENCES

Korolev, Sergey V., Tumanyan, Vladimir G.

Year:

1993

Language:

english

File:

PDF, 525 KB

english, 1993

20

The ranging of amino acids substitution matrices of various types in accordance with the alignment accuracy criterion

Polyanovsky, Valery, Lifanov, Alexander, Esipova, Natalia, Tumanyan, Vladimir

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 3.14 MB

2020

21

A tetrapeptide-based method for polyproline II-type secondary structure prediction

Peter K. Vlasov, Anna V. Vlasova, Vladimir G. Tumanyan, Natalia G. Esipova

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2005

Language:

english

File:

PDF, 132 KB

english, 2005

22

Study and Prediction of Secondary Structure for Membrane Proteins

Amirova, Svetlana R., Milchevsky, Juri V., Filatov, Ivan V., Esipova, Natalia G., Tumanyan, Vladimir G.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2007

Language:

english

File:

PDF, 673 KB

english, 2007

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